Wednesday, March 1, 2017

Eungella to Cairns: the Coral Sea

We rented an apartment in Yorkeys Knob, a small community on the beach about 20 km north of Cairns. It was named for George “Yorkey” Lawson, a fisherman from Yorkshire, England who homesteaded there. We looked in Cairns, a city of 150,000 on the east coast of the Cape York Peninsula, but chose a more relaxed town on the beach north of the city. Cairns spreads out along a mud flat south of the Barron River. The downtown was crowded with traffic and tourists, and we had to pay to park everywhere. In the morning, a constant stream of buses dropped off hundreds of tourists at the marina where they boarded day-boats going to the Great Barrier Reef. Tourists that didn’t go to the reef wandered the Esplanade eating in the restaurants and visiting gift shops and boutiques. I stopped at three dive shops for information on trips to the Great Barrier Reef, and two underwater camera shops to get parts for my camera. Unlike Airlie Beach, dive shops and dive-boat operators are thriving in Cairns. I made a reservation for a day trip on the Tusa 6, which was recommended by one of the dive shops.
Coral bommie (pinnacle) at Hastings Reef


The Tusa 6 is a 24-m (79-ft) catamaran with two decks each with a salon (link). The boat advertises that it can seat 120 people, but only carries 60 (to make you think it’s not crowded?). My trip had about 20 snorkelers and 15 divers and the back deck was crowded. We left the marina at 8:00 AM. Outside the harbor, the swell was 1 m (3 ft) and the wind was blowing 20 knots (23 mph) from the south creating whitecaps as far as I could see. It took us an hour and a half to get to the first dive site. The divers filled out paperwork detailing our experience and certifications, and signed a liability release acknowledging that diving can be dangerous.
Entrance to Cairns marina
We met with Stacy in the salon behind the wheelhouse where she explained the boat’s dive protocols: divers have to go with a buddy; they can be guided by a crew member (for an extra fee), or go unguided; bottom time is 45 minutes; and by Queensland regulations, divers have to return to the boat with 50 bar of air in their tank (a full tank is 200 bar or 2,900 psi). 
Stacy briefing divers about Hastings Reef
When I boarded the boat, I told Stacy that I was doing photography, didn’t have a buddy and wanted to go unguided. She paired me with Mark, in his 30s from San Francisco. He didn’t have a camera, but he had a new buoyancy compensation device, regulator and two dive computers that he wanted to test, so he was content to mosey along while I took pictures.
Mark, my dive buddy, at Hastings Reef
Stacy said that our first dive was at Hastings Reef and a place called the Fish Bowl, a sheltered area inside the reef reached through an opening in the outer reef wall, which descended to about 18 m (59 ft). She said that if we went deeper, we would need to take a spade with us. “Why would I want a spade below 18 m?” I asked, thinking she meant a small garden trowel. “To bury yourself” she said. “It’s a bit of Australian humor” a woman diver said and everyone laughed. Stacy was trying to scare us, or at least make us think it was unsafe to go deeper. Eighteen meters is not very deep; I’ve been beyond that many times and never needed a spade.
Darkcap parrotfish (Scaridae)
Threadfin butterflyfish (Chaetodontidae)
The trip coast $275 AUS ($200 US); for that you get all your dive gear and three dives – two in the morning and one in the afternoon – a buffet lunch and snacks between the morning dives and after the afternoon dive. Getting 35 people suited up, organized and into the water within 15 minutes of arriving at the dive site created chaos on the back deck. Another dive boat was anchored at the site and divers were getting into the water when we arrived. The four unguided divers received a second briefing from the trip leader who showed us a diagram of the dive site on which he drew the boat. He told us the plan was to enter the Fish Bowl, swim around and exit through the reef wall where we would finish our dive. 
Coral pinnacles at Hastings Reef
From the salon behind the wheelhouse, we could see the wall and the Fish Bowl, which was rather small and already crowded with divers from the other boat. Stacy had mentioned two large bommies in deeper water, which weren’t on the map, and I asked the trip leader about them. He pointed to the bommies a couple meters below the surface off the bow and said we could swim around them.
Blackspotted puffer (Tetraodontidae)
Two-line monocle-bream (Nemipteridae)
Mark and I swam around the bommies and back to the large, concrete blocks that anchored the mooring for the Tusa 6, then under the boat and into the Fish Bowl. As we entered, we passed four divers with a guide leaving; as we left, we passed four divers with a guide entering. The boat photographer was stationed inside the bowl with a metal “CAIRNS” sign; divers could have their picture taken with the sign or above a large anemone with anemonefish, which the boat sold for $30 AUS. Mark and I passed the photographer without stopping.
Photographer from the Tusa 6 in the Fish Bowl
Barrier Reef anemonefish (Pomacentridae) - the female is larger than the male
On our second dive at Hastings Reef, Mark and I swam along the reef wall away from the boat. I found several caves near the base of the wall and swam into the larger ones. At 100 bar, we turned around and headed back to the boat. Imagine my surprise when I stumbled on two shovels, a pick and some construction debris scattered on the sandy bottom near the base of the wall. I couldn’t fathom how they got there; there’s no island at Hastings Reef. Maybe they were used during construction of the large concrete moorings for the dive boats. Later, when I told Stacy what I had found, she thought I was joking, until I showed her the picture. I didn’t tell her that we were more than 20 m deep.
Pick and shovels on the sand beyond the reef
A school of juvenile striped catfish (Plotosidae) foraging on the sand
Crimson soldierfish (Holocentridae) in a cave in the reef
Mark and I were the last divers back on the boat; our air consumption was pretty well matched and our dives were more than 50 minutes. We took our gear off and got out of our wetsuits – no wetsuits were allowed the lower salon.  While we were changing, the trip leader came out to tell us that we needed to get our lunch because they were holding seconds for 30 people in the salon until we had eaten.
Bluespotted coral trout (Serranidae)
There are 400 species of hard and soft corals on the Great Barrier Reef, from compact brain and massive corals in areas of high wave energy, to large branching and plate corals in deeper water, to compact branching forms in protected lagoons. Coral reef communities are incredibly diverse, with 1,500 species of fishes and 4,000 species of molluscs (link). I was overwhelmed by the unending array of forms and colors on my first dives – where should I point my camera? At the fish? At the corals? What about the invertebrates? Should I ignore the sand flats with their patch reefs and focus on the reef? 
Hard corals with a variety growth forms
Mostly soft corals
After several dives, I developed a plan – when the visibility was good, I put a dome port (wide angle lens) on my camera and focused on seascapes; when the visibility was less than good, I used a small telephoto lens and focused on individual corals, fishes and invertebrates. Because I made 2-3 dives each day, I could do both during one boat trip. But, as a fish biologist, my first love is marine fishes, which is why they feature prominently in my photos.
Michaelmas Cay
Spotted sweetlips (Haemulidae)
Dot-and-dash goatfish (Mullidae)
In the afternoon, we dove at Michaelmas Cay, a bare sand island less than half an hour from Hastings Reef. The visibility was the worst of the three dives, and there wasn’t much new except for some large staghorn corals in the shallow water. The reef stepped down to a 7-m (23 ft) platform about 10 m (33 ft) wide, and then stepped down again to the sand at the base of the wall 16 m (52 ft) deep. Beyond that, there were patch reefs 2-3 m across and 1-2 m high scattered across the sandy bottom. We didn’t see any rays or sharks in the deeper areas, which was disappointing.
Spotted unicornfish (Acanthuridae)
Blue blanquillo (Malacanthidae)
Slingjaw wrasse (Labridae) with a parasitic isopod (fish louse) on its back
In November, two French tourists in their mid-70s died of heart attacks within minutes of each other while snorkeling together at Michaelmas Cay. They were part of a group of 21 elderly tourists that had “pre-existing medical conditions” (link). A cardiologist in Cairns thought it likely that they were stung by Irukandji, thumb-nail size jellyfish with venom that can cause cardiac arrest in humans (link). Speaking of invertebrates, here are a few of the thousands of species that live on the Great Barrier Reef.
Giant clams have symbiotic algae (zooxanthellae) in their mantle tissues
Leopard sea cucumber
Orange sponge
Divers can walk on the boat with just their swimmers (bathing suit) and get kitted out for diving. I brought my wetsuit, mask, fins and snorkel; the rest of the gear included a weight belt, tank, buoyancy compensation device (BCD), dive computer, pressure gauge and two regulators, one for the diver and a yellow “octopus” regulator for your buddy if he or she runs out of air. The dive computer tracked maximum and average depths, bottom time, no decompression time and, if you go too deep for too long, decompression stops on the way back to the surface. After the dive, by regulation, the trip leader recorded our bottom time, maximum depth and amount of air remaining in our tanks, and then had us sign it.
Christmas tree worms and coral clams in a massive Porites coral
Closeup of a Christmas tree worms (polychaetes)
Thorny oyster
I talked to the skipper on the way back to Cairns. She said we made 20-22 knots over the 30 miles back from the reefs. I asked her about diving the reefs farther offshore; she said that when the offshore winds drop to 10-15 knots and the swells are less than 2 m, they run to those reefs. The calmer periods occur between fronts that spin up the east coast from the Australian Bight. Winter is the windy time; summer is calmer, with higher air temps, higher humidity and lots of rain.
Returning to Cairns
On one of our walks around Cairns, we passed a colony of spectacled flying foxes roosting in trees near the Library. Hundreds of these megabats (1.5 m, 5 ft wingspan) live in this colony. At night, they fly up to 70 km (43 mi) searching for nectar-producing flowers and fruit. While they’re lapping up flower nectar with their long tongue, pollen sticks to the fur on their pointed nose, which they carry to other flowers (cross-pollination). They also distribute seeds over long distances when they eat fruit and spit out the seeds. These activities help maintain the diversity of the tropical forest. Flying foxes are protected, but their numbers are decreasing because of loss of habitat forcing them to live in closer contact with humans (interpretive sign under the colony).
Colony of spectacled flying foxes in Cairns
Spectacled flying foxes
I made a couple more trips on the Tusa 6 while we were in Cairns; Rande came on one of the trips to go snorkeling. I asked the skipper on the way out where we were going. She was talking on the radio to skippers of other dive boats to find out where they were going. We ended up back at the same places and doing the same dives that I did on my first trip. When I checked in, I said I wanted to go unguided. They paired me with Helene, a young woman from Switzerland with only 10 open water dives. There were more than 20 divers (four Japanese with a Japanese-speaking guide, eight guided, four unguided and six novices) and 15 snorkelers. The back deck was chaos with everyone getting into their gear at the same time. The guides staggered the order of groups entering the water; the unguided divers went first, which was fine with me – better to see the reef before the masses scared the larger fishes away.
Helene, my dive buddy, at Hastings Reef
On the first dive at Hastings Reef, Helene and I swam under the boat past a 1-m (3-ft) great barracuda to the mooring line at the bow and descended to the concrete anchor. Novice divers often prefer to descend along the anchor line, which gives them a reference point in the water column. The water was full of particles – great for planktivores, bad for photographers. We swam around the larger of the two bommies, turned around at 120 bar, swam under the boat and into the Fish Bowl where we finished our dive. There was another dive boat moored nearby when we surfaced, and one more arrived before we departed. Too many divers in too small a space.
Great barracuda (Sphyraenidae)
Steephead parrotfish (Scaridae) being cleaned by a wrasse with its head under the gill cover
Back on the boat, we ate fresh fruit while the crew filled our tanks for the second dive, which was the wall off the port side of the boat. We swam through the narrow cut between a tall bommie and the wall into a large school of blue fusiliers, which Helene filmed with her GoPro camera. We zig-zagged up and down the wall inspecting the nooks and crannies. Helene was inexperienced, but she did fine swimming slowly with me while I took pictures. She used her air more quickly than I did, so our dives were 10-15 minutes shorter than they would have been with a more experienced diver. I took her picture and later sent it to her via email.
Blue fusiliers (Caesionidae)
Variegated lizardfish(Synodontidae)
Back on the boat, I saw Rande in the water among the snorkelers. The surface was choppy and many of the snorkelers had their heads out of the water. Its difficult for inexperienced snorkelers to keep water out of their snorkels when the wind is blowing and the surface is like a washing machine. I knew Rande wasn’t having any fun. I put on my weight belt, mask and fins, quickly slipped off stern and swam over to her. She wasn’t comfortable enough to continue and I swam with her back to the boat. One of the crew had seen me go in with a weight belt and told the trip leader, who met me at the stern and told me I couldn’t wear it while snorkeling – another boat rule. He said they regularly have experienced free divers on the boat, but don’t allow them to wear weight belts. I took the belt off, grabbed my camera, jumped back in and swam over to the shallowest part of the Fish Bowl to take photos of corals and fishes. I returned to the boat when the crew called the snorkelers in.
Bigeye seabream (Lethrinidae)
Stars-and-stripes puffer (Tetraodontidae)
We dove at Michaelmas Cay in the afternoon. Helene and I descended under the boat, swam across the shallow reef platforms and dropped down the wall to the sand. At 120 bar we turned back to the boat and up into shallow water. Our dive computers told us that we needed a 2.5 minute decompression stop before surfacing. I could see that she was nervous about the stop; we held hands at 5 m (15 ft) and ascended when her computer went to zero.
Saddle butterflyfish (Chaetodontidae)
Intermediate cardinalfish (Apogonidae)
Tusa Dive runs trips to the Great Barrier Reef most days (link). The day trips spend three hours traveling to and from the dive sites, and five hours on the reef. The guides on my trips had made several thousand dives while working on the Tusa 6, and they have a rhythm and routine for organizing 40-60 people. All activities (diving, eating, traveling) are planned to the quarter hour, and sometimes we were hurried along to keep to the schedule. At each of the stops, there was at least one other boat with a similar number of divers and snorkelers. The popular sites probably see 100-200 divers and snorkelers every day, weather permitting. Even so, the dive sites were in good condition, which is a tribute to the guides and the divers. But I didn’t see many large fishes. The healthiest coral reefs are far from human population centers and have most of the biomass tied up in large predatory fishes.
Debris from shallow-water corals, probably killed by storms, in the deeper part of the reef
Crown-of-thorns starfish (note damage to the stony coral on its right)
Half of the coral cover on the Great Barrier Reef (GBR) was lost between 1985 and 2012; two-thirds of that decline has happened since 1998 (1). The major sources of mortality were damage from cyclones (48%), crown-of-thorns starfish (42%) and coral bleaching (10%); fishing, pollution, tourism, vessel groundings and anchoring, and oil spills have had relatively minor effects on the GBR as a whole. Damage from cyclones is directly related to wind speeds and is expected to increase as the ocean warms and storms increase in intensity (link). Coastal flooding and nutrient pollution have been implicated in outbreaks of the crown-of-thorns starfish. There have been four outbreaks on the Great Barrier Reef since the 1960s; each outbreak followed severe floods and high inputs of sediments and nutrients from coastal rivers, which stimulate plankton blooms that provide food for starfish larvae (link). Rivers in the central and southern parts of the GBR carry 5-9 times the sediment and nutrient loads compared to pre-European settlement resulting in an increase in outbreak frequency from one in 50-80 years pre- settlement to one in 15 years now (link).
Coral bleaching occurs when the polyps loose their symbiotic algae
Deviations of sea-surface temperature (degrees C) from the 1961-1990 mean
Coral bleaching occurs during extended periods of increased sea temperature when coral polyps loose their symbiotic algae (zooxanthellae) and their white skeleton becomes visible. The chart above shows the deviation (anomaly) of sea-surface temperatures from the long-term (1961-1990) mean in degrees Celsius (1 degree C = 1.8 degrees F) (link). Coral bleaching will increase with increased ocean warming.
Closeup of polyps of a colonial coral [polyps are less than 10 mm (0.4 in) across]
Mushroom corals are single polyps up to 25 cm (10 in) across
We were getting ready to leave and I was packing the car next to a guy in his early 50s with tattooed arms and black wavy hair unloading boxes from the trunk of his car. He asked if we were heading out for the day; I said no, we were heading north to Port Douglas. “Good on you mate; most people think that Australia ends at Cairns.” He asked if we were from the States (our “soft” American accent gives us away). He was from the state of South Australia about 4,000 km (2,500 mi) away; it took him four days to drive to Cairns. He was on business and said he managed the pilots that guided large commercial ships through the Great Barrier Reef.
Branching corals above columnar corals
Delicate sea whips are soft corals
Laminar coral in the shape of a vase
About 6,000 vessels longer than 50 m (164 ft) transit the Great Barrier Reef each year, seventy-five percent of them take a route between the coast and the reef; most of those are bulk carriers. Their cargoes include bauxite and alumina, manganese, iron ore, coal, sugar, silica sand, container freight and petroleum products (link). At Australia’s request, the International Maritime Organisation designated the Great Barrier Reef a Particularly Sensitive Area, the first of its kind in the world. Vessel navigation and pollution prevention controls include: electronic navigation charts and aids to navigation; requirements for pilotage; designated shipping routes and ship routing measures; vessel traffic monitoring 24 hours a day and intervention if ships stray beyond limits; and emergency response assets, including towing and oil spill response (link).
Soft corals lack a stony skeleton and often resemble plants
Feather stars (crinoids) collect food from the water with the sticky side branches on their arms
Polycarpa, an ascidian or sea squirt, feeds by passing water through its body
The pilots are master mariners; some are retired military, others spent their lives at sea. None were young – “it’s a job for the most experienced mariners.” The route inside the reef is shallow with lots of reefs, and the pilots, who are well paid, know every kilometer. He said it was the fastest way around eastern Australia, but that the large oil companies do not send their tankers inside the GBR – “too risky if something goes wrong.” He had worked on oil and gas drilling rigs in the Middle East and off Australia, but had never been a pilot. I asked him how he “managed” the pilots; he said he stroked their egos. He said we’d love Port Douglas and wished us safe travels.
Turtle weed, a common seaweed (macroalga), has a toxin that defends against herbivores
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(1) From 1985 to 2012, the Australian Institute of Marine Science conducted 2,258 visual surveys of 214 of the approximately 3,000 coral reefs on the Great Barrier Reef (GBR). Average coral cover declined 0.53% per year from 28% in 1985 to 13.8% in 2012, and 1.45% per year from 2006 to 2012. The decline in coral cover probably began before 1985, so the 27-year estimate is conservative. Coral cover and mortality were not uniform across the GBR; cover was higher (>35%) and mortality was lower (-0.19% per year, which means coral cover was increasing) in the far north away from human population centers, compared to the southern GBR (>30 % cover, 0.47% per year mortality) and central inshore reefs (<25% cover, 1.12% per year mortality), which are closer to coastal cities. Compared to coral reefs in other parts of the world, like the Caribbean where coral cover is also decreasing about 1.4% per year, the GBR has not experienced significant mortalities from diseases, or a “phase shift” from coral-dominated to algal-dominated reefs (due to overexploitation of herbivorous fishes). The scientists predicted that “[w]ithout significant changes to the rates of disturbance and coral growth, coral cover in the central and southern regions of the GBR is likely to decline to 5–10% by 2022” (link). 

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